Commits

Commits on Aug 26, 2024

Merge pull request #233 from seqan/h-2-patch-2
sarahet
authored
35783d3
Update README.rst
h-2
authored
c73bbf4

Commits on Aug 5, 2024

Merge pull request #232 from h-2/prerel301
h-2
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7512a3f
[ci] update macos runner to -13
h-2
committed
3f3bbfb

Commits on Aug 4, 2024

[doc] fix documentation for --input-alphabet
h-2
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6b9ffa0
[misc] update citation and copyright
h-2
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6ac098f
[misc] bump version
h-2
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e678917

Commits on Jul 22, 2024

Merge pull request #230 from seqan/h-2-patch-1
h-2
authored
0055ca9

Commits on Jul 21, 2024

Update README.rst
h-2
authored
fd9d865

Commits on Jan 9, 2024

Merge pull request #227 from h-2/taxIds
sarahet
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febf14a
[fix] check presence of taxtree in index
h-2
committed
b16b2d0

Commits on Dec 20, 2023

Merge pull request #225 from sarahet/fasta_formats
h-2
authored
dc57641

Commits on Dec 19, 2023

Fix zlib support for static macos build
sarahet
committed
cf4ee1f

Commits on Dec 14, 2023

Merge pull request #224 from sarahet/fasta_formats
h-2
authored
a3713b7
Remove unused file from test data
sarahet
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5665dc2
Allow .fna and .faa fasta extensions
sarahet
committed
05262cd

Commits on Nov 26, 2023

Merge pull request #222 from h-2/align_bug
sarahet
authored
d995cb5
[test] update link to testdata repo
h-2
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01b7d01
[test] change output file names to be identical to input filenames
h-2
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35fbcb5
[feature] add pairs profiles
h-2
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6cd1d33
[fix] exception handling of the sharg-parser
h-2
committed
aad68eb
[fix] pairs counting
h-2
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2224cd0
[misc] redesign widening, merging and prefilter of matches; change band to sqrt
h-2
committed
40b49a0

Commits on Nov 17, 2023

[fix] alignment bug
h-2
committed
f1ebc9a

Commits on Jul 25, 2023

Merge pull request #221 from h-2/remove_dispatcher
sarahet
authored
73f370d
[misc] remove dispatcher; clean-up cmake
h-2
committed
6485cd9

Commits on Jul 24, 2023

Merge pull request #220 from h-2/fixstatic
sarahet
authored
9bacf44

Commits on Jul 21, 2023

[infra] add gcc13 tests, remove gcc10
h-2
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42eae85
[misc] track biocpp changes and gcc13
h-2
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bbef694
[submodule] update biocpp modules
h-2
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3053555
Merge pull request #219 from h-2/fixstatic
sarahet
authored
cf59351

Commits on Jul 17, 2023

[fix] static builds
h-2
committed
2c5389f

Commits on Jul 13, 2023

Merge pull request #216 from h-2/bifm_macro
sarahet
authored
40fff6c

Commits on Jul 12, 2023

[misc] deactivate BIFM by default
h-2
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79f0bf0
Merge pull request #215 from sarahet/default_eval
h-2
authored
35e7204